Junlong Jiang

Contact Information

College of Fisheries and Life Science
Shanghai Ocean University
999 Hucheng Huan Road, Pudong New District
Phone:+86 13918732420
email:jjlong233@gmail.com

RESEARCH INTEREST

  1. Developing new molecular methods to investigate genomic variation

  2. Leveraging genome enrichment data to elucidate population evolution

  3. Improving protocols of multiplexed assay

  4. Dealing with data from next-generation sequencing (NGS)

Education

Bachelor in Aquaculture(2018 - 2022)
College of Fishery and Life Science, Shanghai Ocean University
Overall GPA: 3.69/4.0
Master in Biology(Expected June 2025)
College of Fishery and Life Science, Shanghai Ocean University
Overall GPA: 3.76/4.0

RESEARCH EXPERIENCE

  1. Performing cross species gene capture in Hilsa shad (Tenualosa ilisha) (coauthored in Sarker et al., 2021 Sci Rep)

  2. Performing gene capture in tapertail anchovy (Coilia nasus) and SNP calling (coauthored in Huang et al,. 2022 Mar Bio)

  3. Designing a protocol of enriching vertebrate mitochondria

  4. Developing and optimizing “one-step” library preparation protocol based on multiple annealing and looping-based amplification cycles (MALBAC) technique

  5. Performing positive selection and population history analysis between Siniperca undulata and S. obscura (coauthored in Lu et al., 2023 G3)

  6. Reviewing existing high-throughput genotyping methods and evaluating their potential in conserving aquatic genetic resources (coauthored in Li., 2023 JWAS)

  7. Work in progress (expected to complete by Dec 2024):
    Developing a cost-effective and high-throughtput genotyping panel for the Chinese mitten crab (Eriocheir sinensis) based on molecular inversion probe (MIP) and programming a customized pipeline for data analysis (The software copyright has been granted)


Publications

  1. Li, C. and Jiang, J. (2023), High-throughput genotyping in estimating genetic resources and detecting pathogens in aquaculture. J World Aquac Soc, 54: 558-565. https://doi.org/10.1111/jwas.12996

  2. Liang Lu#, Junlong Jiang#, Jinliang Zhao, Chenhong Li, Comparative genomics revealed drastic gene difference in two small Chinese perches, Siniperca undulata and S. obscura, G3 Genes|Genomes|Genetics, Volume 13, Issue 7, July 2023, jkad101, https://doi.org/10.1093/g3journal/jkad101

  3. Huang, H., Jiang, J., Cheng, F. et al. Range-wide population genetics of the tapertail anchovy Coilia nasus based on exon-capture data. Mar. Biodivers. 52, 43 (2022). https://doi.org/10.1007/s12526-022-01283-3

  4. 4.Sarker, A., Jiang, J., Naher, H. et al. Cross-species gene enrichment revealed a single population of Hilsa shad (Tenualosa ilisha) with low genetic variation in Bangladesh waters. Sci Rep 11, 11560 (2021). https://doi.org/10.1038/s41598-021-90864-6


TECHNICAL SKILLS

  1. Proficient programming skills in Python and Shell

  2. Competent in Linux server’s operation and maintenance

  3. Bioinformatics tools: MIP assay related software (e.g. MIPgens, MIPWrangler), Genome analysis (e.g. GATK, PAML), Basic NGS data manipulation (e.g. Blast, fastp, pandaseq)

  4. Molecular experiment skills: MIP; MALBAC; Target gene enrichment; Multiplex PCR; NGS library preparation

  5. Strong motivation and patience in developing experimental protocols


LANGUAGE

  1. English: Fluent, IELTS General Score = 7

  2. Chinese: Native